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Health·G Space·Evidence-backed gain·Published 2026-09-20

Leveraging time-series electronic health records with large language models for chronic kidney disease diagnosis in primary care

Abstract: Chronic kidney disease (CKD) presents a growing public health challenge in China, exacerbated by low patient awareness and limited nephrology resources. This study evaluated the potential of large language models (LLMs) to support CKD diagnosis in primary care using time-series electronic health record (EHR) data. Longitudinal data were extracted from the EHR system of Weinan, China. Among 29 963 adults meeting inclusion criteria, 2300 participants were randomly sampled to generate clinical vignettes. CKD status…

TRV-2026-1152Peer-reviewedPermanent record — cite & verify
Leveraging time-series electronic health records with large language models for chronic kidney disease diagnosis in primary care

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The quick read

Chronic kidney disease (CKD) presents a growing public health challenge in China, exacerbated by low patient awareness and limited nephrology resources. This study evaluated the potential of large language models (LLMs) to support CKD diagnosis in primary care using time-series electronic health record (EHR) data.

Using the DeepSeek LLM with prompt engineering, we generated binary CKD diagnoses and probability scores based on EHR data. Diagnostic performance was evaluated using accuracy, sensitivity, specificity, F1 score, area under the curve (AUC) and the detection rate for early kidney injury and compared with traditional machine learning (ML) models.

Main points
  • Chronic kidney disease (CKD) presents a growing public health challenge in China, exacerbated by low patient awareness and limited nephrology resources.
  • This study evaluated the potential of large language models (LLMs) to support CKD diagnosis in primary care using time-series electronic health record (EHR) data.
  • Longitudinal data were extracted from the EHR system of Weinan, China.
Gain

Using 1-month EHR data, the LLM achieved an accuracy of 87.0%, AUC of 0.921, F1 score of 0.579, sensitivity of 89.1%, specificity of 86.8%, and detection rate for early kidney injury of 42.2%.

The rundown

Longitudinal data were extracted from the EHR system of Weinan, China. Among 29 963 adults meeting inclusion criteria, 2300 participants were randomly sampled to generate clinical vignettes.

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