Random Forest
For the task of analyzing survival data to derive risk factors associated with mortality, physicians, researchers, and biostatisticians have typically relied on certain types of regression techniques, most notably the Cox model. With the advent of more widely distributed computing power, methods which require more complex mathematics have become increasingly common. Particularly in this era of "big data" and machine learning, survival analysis has become methodologically broader. This paper aims to explore one t…
SEER Self Instructional Manuals for Cancer Registrars - Book 8 - Antineoplastic Drugs (Third Edition, 1993) by National Institutes of Health. Public domain
Published in 2017, this methods paper explored Random Forest as an alternative to Cox regression for survival analysis. Using 66,807 colon cancer cases from the SEER database, the authors built both a Cox model and a Random Forest model to derive mortality-associated risk factors and compared their predictive performance.
The comparison matters because it demonstrates that a machine learning approach using bootstrap aggregation and randomization of predictors can match traditional biostatistical methods for cancer prognosis, achieving about 18% concordance error. What remains uncertain from the text is how the models would perform outside this SEER colon cancer sample or in prospective clinical use.
- Study compared traditional Cox model to Random Forest for survival data analysis
- Used colon cancer data (n = 66,807) from the SEER database
- Random Forest described as using bootstrap aggregation and randomization of predictors
- Both models achieved concordance error rate of approximately 18%
Random Forest survival model achieved comparable predictive accuracy to Cox regression on colon cancer mortality data, with low concordance error.
The rundown
The paper frames survival analysis as traditionally reliant on Cox regression, noting that more computationally intensive methods have become common in the era of big data and machine learning.
Authors constructed both a Cox model and a Random Forest model on the same SEER colon cancer cohort of 66,807 cases to compare performance on identical data.
Sources
- Peer-reviewedJournal of Insurance Medicine2017-01-01
How should this claim be treated?
ace
The debate