60/100

Moderate evidence

ChatGPT matched hematologists on 78.8% of 560 leukemia flow cytometry cases, study finds

Study title: Diagnostic agreement between ChatGPT-based interpretation of laboratory-generated flow cytometry graphical outputs and hematologist consensus in suspected acute leukemia

Evidence type
Observational study
Sample
n = 560
Sources
1 sourcePeer-reviewed
Published
2 min read

Study title: Diagnostic agreement between ChatGPT-based interpretation of laboratory-generated flow cytometry graphical outputs and hematologist consensus in suspected acute leukemia

Researchers tested ChatGPT Plus running GPT-5.5 on de-identified PDF images of flow cytometry dot plots from 560 patients undergoing first diagnostic work-up for suspected acute leukemia. Against the consensus of two hematologists, the model chose the right diagnosis in 78.8% of cases from five categories: no pathology, MDS, AML, B-ALL or T-ALL.

Read the study abstract

Accurate, rapid, and standardized interpretation of multiparametric flow cytometry findings is essential for clinical decision-making in patients evaluated for suspected acute leukemia. This study aimed to evaluate the diagnostic performance of ChatGPT, a general-purpose large language model, in interpreting de-identified, laboratory-generated flow cytometry graphical outputs from patients with suspected acute leukemia and to assess its agreement with the consensus interpretation of two hematologists in terms of…

58Gain side

How the two sides scoreClose call

54Problem side

The gain

In a retrospective study of 560 patients with suspected acute leukemia, ChatGPT (GPT-5.5) reading flow cytometry plots matched hematologist consensus diagnoses with 78.8% accuracy and substantial agreement (kappa 0.712).

The problem

In a retrospective study of 560 suspected acute leukemia cases, ChatGPT (GPT-5.5) overestimated blast percentage by a mean 3.92 points and differed systematically from hematologists on AML (p = 0.008), T-ALL (p = 0.023) and no-pathology cases (p = 0.041).

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What the scores mean

G is the gain side, out of 100. It goes up when the gain is specific, when it measurably helped people and when the sources behind it are strong.

P is the problem side, out of 100. It goes up when the problem is specific, when it measurably hurt people and when the sources behind it are strong.

In brief

Agreement was substantial (Cohen's kappa 0.712), and blast percentage estimates correlated strongly with the hematologists' (r = 0.818). But the chatbot overestimated blasts by an average of 3.92 percentage points and differed systematically from experts on AML, T-ALL and no-pathology classification.

The authors conclude the approach shows promise for preliminary classification and quality assurance, while stating that hematologist validation remains essential where diagnostic stakes are high, such as AML and T-ALL calls, blast counts and hematogone discrimination.

Main points

  1. The study was a retrospective observational validation of 560 patients who had bone marrow aspiration and flow cytometric immunophenotyping at initial evaluation.
  2. Images came from a three-tube acute leukemia panel with 28 antibody-fluorochrome combinations; raw FCS files were not provided to the model.
  3. Per-diagnosis sensitivity ranged from 69.2% to 87.3% and positive predictive value from 60.0% to 93.5%.
  4. Sensitivity was highest for MDS, while positive predictive value was highest for no pathology.
  5. Blast percentage estimates correlated with hematologists' at r = 0.818, with a mean overestimate of 3.92 percentage points.
  6. Hematogone detection reached 89.5% accuracy, 70.3% sensitivity and 92.4% specificity.

The full story

Between May 4 and 15, 2026, the team uploaded laboratory-generated PDF images directly through the ChatGPT Plus web interface. Each case used the same standardized prompt asking for a blast percentage, a single most likely diagnosis and whether hematogones were present. The first response for every case was archived and encoded without adjudication.

The reference standard was the consensus diagnosis of two hematologists. Diagnosis-specific performance used one-versus-rest sensitivity, specificity, predictive values, accuracy and F1-score, with Cohen's kappa for overall agreement, Pearson correlation and Bland-Altman analysis for blasts.

Results showed 78.8% overall accuracy (95% CI 75.2%-81.9%) and kappa of 0.712. Significant systematic differences from hematologists appeared for no pathology (p = 0.041), AML (p = 0.008) and T-ALL (p = 0.023).

Hematogone detection was more specific than sensitive: 92.4% specificity against 70.3% sensitivity, at 89.5% accuracy. The authors say expert validation remains essential for high-consequence scenarios.

What this doesn’t fix

Expert hematologist validation remains essential, particularly for AML and T-ALL classification, blast percentage estimation and hematogone discrimination, where ChatGPT differed systematically from experts or overestimated blasts.

Sources

1 on file
  1. Peer-reviewed2026-11-11

Talk it over

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This record found a gain and a problem in the same place. Which matters more to you, and who might answer differently?

Start with a question

ChatGPT matched hematologists on 78.8% of 560 leukemia flow cytometry cases, study findshttps://truvace.com/item/diagnostic-agreement-between-chatgpt-based-interpretation-of-laboratory-generate

  1. This record found a gain and a problem in the same place. Which matters more to you, and who might answer differently?

    The gain In a retrospective study of 560 patients with suspected acute leukemia, ChatGPT (GPT-5.5) reading flow cytometry plots matched hematologist consensus diagnoses with 78.8% accuracy and substantial agreement (kappa 0.712).

    The problem In a retrospective study of 560 suspected acute leukemia cases, ChatGPT (GPT-5.5) overestimated blast percentage by a mean 3.92 points and differed systematically from hematologists on AML (p = 0.008), T-ALL (p = 0.023) and no-pathology cases (p = 0.041).

    Answer in the thread
  2. How do we know? What can this kind of evidence show, and what can’t it?

    The evidence This rests on an observational study with a sample of 560, from Cytometry Part B: Clinical Cytometry.

    Answer in the thread
  3. What does it leave open? What else would you want to know before acting on it?

    The record’s own caveat Expert hematologist validation remains essential, particularly for AML and T-ALL classification, blast percentage estimation and hematogone discrimination, where ChatGPT differed systematically from experts or overestimated blasts.

    Answer in the thread
  4. Have you seen AI used this way where you study, work or live? Did it go the same way?

    Answer in the thread

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